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Sample GSM386157 Query DataSets for GSM386157
Status Public on Jun 02, 2009
Title Universal Human Reference RNA amplified using MessageAmp™ II aRNA Amplification (Ambion), 250 pg, rep2
Sample type RNA
Source name Universal Human Reference RNA
Organism Homo sapiens
Characteristics protocol: MessageAmp™ II aRNA Amplification (Ambion)
Biomaterial provider Stratagene
Extracted molecule total RNA
Extraction protocol not applicable
Label biotin
Label protocol Biotinylated targets were prepared according to manufacturer's instructions (Ambion)
Hybridization protocol Hybridization mixture was prepared according to Affymetrix procedures
Scan protocol GeneChips were scanned using a 7G scanner (Affymetrix)
Description no additional information
Data processing MAS5.0
Submission date Mar 25, 2009
Last update date Aug 28, 2018
Contact name charles decraene
Organization name Institut Curie
Street address 26 rue d'ULM
City Paris
ZIP/Postal code 75248 cedex 05
Country France
Platform ID GPL570
Series (1)
GSE15398 Evaluation of methods for amplification of picogram amounts of total RNA for whole genome expression profiling
Reanalyzed by GSE119087

Data table header descriptions
VALUE done by mas5.0
ABS_CALL done by mas5.0
DETECTION P-VALUE done by mas5.0

Data table
AFFX-BioB-5_at 395.618 P 4.42873e-05
AFFX-BioB-M_at 617.808 P 4.42873e-05
AFFX-BioB-3_at 323.549 P 4.42873e-05
AFFX-BioC-5_at 1112.87 P 4.42873e-05
AFFX-BioC-3_at 1329.5 P 4.42873e-05
AFFX-BioDn-5_at 3235.78 P 4.42873e-05
AFFX-BioDn-3_at 4336.73 P 4.42873e-05
AFFX-CreX-5_at 13481.2 P 5.16732e-05
AFFX-CreX-3_at 14243.4 P 4.42873e-05
AFFX-DapX-5_at 2.17461 A 0.544587
AFFX-DapX-M_at 108.064 P 0.000389797
AFFX-DapX-3_at 1508.37 P 4.42873e-05
AFFX-LysX-5_at 7.17183 P 0.00931687
AFFX-LysX-M_at 68.7646 P 7.00668e-05
AFFX-LysX-3_at 261.481 P 4.42873e-05
AFFX-PheX-5_at 2.07614 A 0.897855
AFFX-PheX-M_at 54.7358 P 7.00668e-05
AFFX-PheX-3_at 230.191 P 5.16732e-05
AFFX-ThrX-5_at 6.17632 A 0.239063
AFFX-ThrX-M_at 12.2038 P 0.0144686

Total number of rows: 54675

Table truncated, full table size 1641 Kbytes.

Supplementary file Size Download File type/resource
GSM386157.CEL.gz 7.4 Mb (ftp)(http) CEL
GSM386157.CHP.gz 495.7 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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