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Sample GSM386384 Query DataSets for GSM386384
Status Public on Jun 02, 2009
Title Universal Human Reference RNA amplified using WT-Amplification™ Pico kit (Nugen), 50 pg, rep1
Sample type RNA
 
Source name Universal Human Reference RNA
Organism Homo sapiens
Characteristics protocol: WT-Amplification™ Pico kit (Nugen)
Biomaterial provider Stratagene
Extracted molecule total RNA
Extraction protocol not applicable
Label biotin
Label protocol FL-Ovation™ cDNA Biotin Module V2 (Nugen)
 
Hybridization protocol Hybridization mixture was prepared according to Nugen and Affymetrix procedures
Scan protocol GeneChips were scanned using a 7G scanner (Affymetrix)
Description no additional information
Data processing MAS5.0
 
Submission date Mar 25, 2009
Last update date Aug 28, 2018
Contact name charles decraene
Organization name Institut Curie
Street address 26 rue d'ULM
City Paris
ZIP/Postal code 75248 cedex 05
Country France
 
Platform ID GPL570
Series (1)
GSE15398 Evaluation of methods for amplification of picogram amounts of total RNA for whole genome expression profiling
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE done by mas5.0
ABS_CALL done by mas5.0
DETECTION P-VALUE done by mas5.0

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 3282 P 4.42873e-05
AFFX-BioB-M_at 7230.21 P 4.42873e-05
AFFX-BioB-3_at 5415.25 P 4.42873e-05
AFFX-BioC-5_at 12642.1 P 4.42873e-05
AFFX-BioC-3_at 7703.79 P 4.42873e-05
AFFX-BioDn-5_at 26703.4 P 4.42873e-05
AFFX-BioDn-3_at 42016 P 4.42873e-05
AFFX-CreX-5_at 74711.5 P 5.16732e-05
AFFX-CreX-3_at 78995.6 P 4.42873e-05
AFFX-DapX-5_at 5.63802 A 0.814869
AFFX-DapX-M_at 23.1696 A 0.588627
AFFX-DapX-3_at 2.91566 A 0.953547
AFFX-LysX-5_at 3.22375 A 0.904333
AFFX-LysX-M_at 2.28784 A 0.916426
AFFX-LysX-3_at 2.47861 A 0.945787
AFFX-PheX-5_at 3.93762 A 0.963443
AFFX-PheX-M_at 6.20967 A 0.852061
AFFX-PheX-3_at 1.6325 A 0.973889
AFFX-ThrX-5_at 21.9609 A 0.239063
AFFX-ThrX-M_at 16.4058 A 0.529772

Total number of rows: 54675

Table truncated, full table size 1599 Kbytes.




Supplementary file Size Download File type/resource
GSM386384.CEL.gz 6.9 Mb (ftp)(http) CEL
GSM386384.CHP.gz 513.8 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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