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Sample GSM389733 Query DataSets for GSM389733
Status Public on Sep 03, 2009
Title 06R030 RA
Sample type RNA
 
Source name Peripheral Mononuclear Blood Cells
Organism Homo sapiens
Characteristics status: Rheumatoid Arthritis Patient
gender: Female
age: 54
tissue: Blood
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from Peripheral Blood using the PAXgene RNA isolation kit (PreAnalytix, GmbH, Germany). Total RNA yield (ng) was determined spectrophotometrically using the NanoDrop ND-1000 (Wilmington). Total RNA profile was determined using the Bioanalyzer 2100 (Agilent).
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplification kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description none
Data processing The data were normalised using quantile normalisation with Beadstudio
 
Submission date Apr 06, 2009
Last update date Sep 03, 2009
Contact name Robert Olaso
E-mail(s) olaso@cng.fr
Phone 0000000000
Fax 0000000000
Organization name CEA IG
Department CNG Technology Department
Lab Gene Expression Platform
Street address 2 rue gaston cremieux
City Evry
ZIP/Postal code 91057
Country France
 
Platform ID GPL6102
Series (1)
GSE15573 Immunity and Defense Genes in Peripheral Blood Mononuclear Cells of Rheumatoid Arthritis patients

Data table header descriptions
ID_REF
VALUE quantile normalized

Data table
ID_REF VALUE
ILMN_1809034 182.8647
ILMN_1660305 294.0308
ILMN_1792173 236.392
ILMN_1762337 142.4923
ILMN_1736007 146.9072
ILMN_1787689 153.805
ILMN_1731507 126.6419
ILMN_1814316 147.5446
ILMN_1745607 136.7474
ILMN_1757454 173.7269
ILMN_1668111 194.1247
ILMN_1735045 153.0017
ILMN_1680754 198.265
ILMN_1659452 141.4947
ILMN_1767388 190.8912
ILMN_1673870 121.6952
ILMN_1675204 159.2292
ILMN_1755321 206.9456
ILMN_1698554 239.8667
ILMN_1814092 198.6556

Total number of rows: 48701

Table truncated, full table size 1040 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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