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Sample GSM392 Query DataSets for GSM392
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-39, tumor 2 (part 1 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=39
died=FALSE
tumorsize.cm=5
sex=m
age=78
RNA=total
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_aug99 filter=3624220 reuse=7 date=04-Oct-2000
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL9
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 291894 308025 -16131
2 229318 308025 -78707
3 619054 308025 311029
4 218009 308025 -90016
5 456441 308025 148416
6 8023613 308025 7715588
7 2274534 308025 1966509
8 752164 308025 444139
9 345351 308025 37326
10 115333 308025 -192692
11 1092761 308025 784736
12 508142 308025 200117
13 1252525 308025 944500
14 159630 308025 -148395
15 243311 308025 -64714
16 231823 308025 -76202
17 326183 367236 -41053
18 420983 367236 53747
19 140207 367236 -227029
20 660841 367236 293605

Total number of rows: 36864

Table truncated, full table size 978 Kbytes.




Supplementary data files not provided

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