|
| Status |
Public on Jul 10, 2019 |
| Title |
Patient 16/15 LMCs ex vivo |
| Sample type |
RNA |
| |
|
| Source name |
Human LMCs
|
| Organism |
Homo sapiens |
| Characteristics |
patients: 16/15
tissue: Liver
stimulation: Ex vivo
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Bioanalyser.
|
| Label |
biotin
|
| Label protocol |
Illumina protocol
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
Biological replicate 4
A16-15LE
|
| Data processing |
The data were normalised using quantile normalisation with Illumina GenomeStudio software
|
| |
|
| Submission date |
Jul 09, 2019 |
| Last update date |
Jul 10, 2019 |
| Contact name |
Erin Heather Doyle |
| E-mail(s) |
erin.doyle@mssm.edu
|
| Organization name |
Icahn School of Medicine at Mount Sinai
|
| Department |
Liver
|
| Street address |
1425 Madison Ave
|
| City |
New York |
| State/province |
New York |
| ZIP/Postal code |
10029 |
| Country |
USA |
| |
|
| Platform ID |
GPL10904 |
| Series (2) |
| GSE134040 |
Individual liver plasmacytoid dendritic cells are capable of producing IFNa and multiple additional cytokines during chronic HCV infection [exp1] |
| GSE134042 |
Individual liver plasmacytoid dendritic cells are capable of producing IFNa and multiple additional cytokines during chronic HCV infection |
|
