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Sample GSM400422 Query DataSets for GSM400422
Status Public on May 08, 2009
Title heart 27
Sample type RNA
 
Source name heart
Organism Mus musculus
Characteristics tissue: heart
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description heart
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 3.459214
4304921 2.615727
4304922 2.267825
4304923 6.888573
4304925 7.517803
4304927 3.739741
4304928 13.75849
4304929 10.355927
4304930 4.501928
4304931 4.857931
4304932 5.489104
4304933 5.478691
4304934 3.320975
4304935 3.113651
4304937 4.925807
4304938 2.613408
4304939 1.932039
4304940 4.143907
4304941 5.198112
4304942 8.493969

Total number of rows: 1201338

Table truncated, full table size 19836 Kbytes.




Supplementary file Size Download File type/resource
GSM400422.CEL.gz 36.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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