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Sample GSM4008724 Query DataSets for GSM4008724
Status Public on Mar 28, 2023
Title IL-13 stimulated cells vs Unstimulated from donor #1
Sample type RNA
 
Channel 1
Source name neutrophils isolated from blood
Organism Homo sapiens
Characteristics donor number: Donor 1
stimulation type: Unstimulated
Treatment protocol unstimulated or stimulated with 10ng/ml IL-13
Growth protocol Freshly isolated human neutrophils
Extracted molecule polyA RNA
Extraction protocol Qiagen RNAeasy (#74104) kit protocol
Label Cy3
Label protocol Nugen Ovation V2, Nugen FL-Ovation cDNA Fluorescent Module
 
Channel 2
Source name neutrophils isolated from blood
Organism Homo sapiens
Characteristics donor number: Donor 1
stimulation: IL-13
Treatment protocol unstimulated or stimulated with 10ng/ml IL-13
Growth protocol Freshly isolated human neutrophils
Extracted molecule polyA RNA
Extraction protocol Qiagen RNAeasy (#74104) kit protocol
Label Cy5
Label protocol Nugen Ovation V2, Nugen FL-Ovation cDNA Fluorescent Module
 
 
Hybridization protocol Standard Agilent protocol
Scan protocol Agilent Technologies Scanner G2505C - 5 microns per pixel
Description Biological replicate 1 of 3.
Data processing Agilent Feature extraction version GE2_105_Dec08
 
Submission date Aug 05, 2019
Last update date Mar 28, 2023
Contact name Ilkka Junttila
E-mail(s) ilkka.junttila@tuni.fi
Organization name University of Tampere
Department Institute of Medical and Life Science
Lab Cytokine biology
Street address Arvo Ylpön katu 34
City Tampere
State/province Tampere
ZIP/Postal code 33520
Country Finland
 
Platform ID GPL4133
Series (1)
GSE135426 Human neutrophils stimulated with IL-13.

Data table header descriptions
ID_REF
VALUE Normalized (loess for within array norm. and quantile for between array norm.)) log2 ratio (Cy5/Cy3).

Data table
ID_REF VALUE
12 -0.116255050259634
13 -0.110610103158798
14 -0.040944767918452
15 0.0780153854538668
16 0.497497155981961
17 0.146095941167387
18 -0.000383708672358374
19 0.424640012482433
20 -0.101392884466127
21 0.0786696173952208
22 -0.0210035655652749
23 0.113438275391496
24 -0.0130099890453348
25 0.418889147458877
26 0.107864035199328
27 -0.133220793464948
28 -0.0190592114206138
29 0.0231890109895154
30 1.80212275204831
31 -0.010589642925674

Total number of rows: 43376

Table truncated, full table size 1044 Kbytes.




Supplementary file Size Download File type/resource
GSM4008724_Hsha_251485034909_S01_GE2_105_Dec08_1_2.txt.gz 15.5 Mb (ftp)(http) TXT
Processed data included within Sample table

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