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Sample GSM4008726 Query DataSets for GSM4008726
Status Public on Mar 28, 2023
Title IL-13 stimulated cells vs Unstimulated from donor #2
Sample type RNA
 
Channel 1
Source name neutrophils isolated from blood
Organism Homo sapiens
Characteristics donor number: Donor 2
stimulation type: Unstimulated
Treatment protocol unstimulated or stimulated with 10ng/ml IL-13
Growth protocol Freshly isolated human neutrophils
Extracted molecule polyA RNA
Extraction protocol Qiagen RNAeasy (#74104) kit protocol
Label Cy3
Label protocol Nugen Ovation V2, Nugen FL-Ovation cDNA Fluorescent Module
 
Channel 2
Source name neutrophils isolated from blood
Organism Homo sapiens
Characteristics donor number: Donor 2
stimulation: IL-13
Treatment protocol unstimulated or stimulated with 10ng/ml IL-13
Growth protocol Freshly isolated human neutrophils
Extracted molecule polyA RNA
Extraction protocol Qiagen RNAeasy (#74104) kit protocol
Label Cy5
Label protocol Nugen Ovation V2, Nugen FL-Ovation cDNA Fluorescent Module
 
 
Hybridization protocol Standard Agilent protocol
Scan protocol Agilent Technologies Scanner G2505C - 5 microns per pixel
Description Biological replicate 2 of 3.
Data processing Agilent Feature extraction version GE2_105_Dec08
 
Submission date Aug 05, 2019
Last update date Mar 28, 2023
Contact name Ilkka Junttila
E-mail(s) ilkka.junttila@tuni.fi
Organization name University of Tampere
Department Institute of Medical and Life Science
Lab Cytokine biology
Street address Arvo Ylpön katu 34
City Tampere
State/province Tampere
ZIP/Postal code 33520
Country Finland
 
Platform ID GPL4133
Series (1)
GSE135426 Human neutrophils stimulated with IL-13.

Data table header descriptions
ID_REF
VALUE Normalized (loess for within array norm. and quantile for between array norm.)) log2 ratio (Cy5/Cy3).

Data table
ID_REF VALUE
12 -0.161938477419222
13 -0.375470550966011
14 -0.139279258058648
15 0.0292542386157724
16 0.857983950489412
17 0.342856573297283
18 -0.068743559499989
19 0.617381190986624
20 -0.0825138991750682
21 -0.107275201244065
22 -0.102059635626926
23 -0.135677141924903
24 -0.0408717277246033
25 0.43067729506763
26 -0.0560045870092374
27 -0.182419512293734
28 0.0355059916757101
29 -0.0379012257336973
30 1.05375666914505
31 -0.0790214993590599

Total number of rows: 43376

Table truncated, full table size 1046 Kbytes.




Supplementary file Size Download File type/resource
GSM4008726_Hsha_251485034908_S01_GE2_105_Dec08_1_2.txt.gz 15.6 Mb (ftp)(http) TXT
Processed data included within Sample table

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