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Sample GSM4008728 Query DataSets for GSM4008728
Status Public on Mar 28, 2023
Title IL-13 stimulated cells vs Unstimulated from donor #3
Sample type RNA
 
Channel 1
Source name neutrophils isolated from blood
Organism Homo sapiens
Characteristics donor number: Donor 3
stimulation type: Unstimulated
Treatment protocol unstimulated or stimulated with 10ng/ml IL-13
Growth protocol Freshly isolated human neutrophils
Extracted molecule polyA RNA
Extraction protocol Qiagen RNAeasy (#74104) kit protocol
Label Cy3
Label protocol Nugen Ovation V2, Nugen FL-Ovation cDNA Fluorescent Module
 
Channel 2
Source name neutrophils isolated from blood
Organism Homo sapiens
Characteristics donor number: Donor 3
stimulation: IL-13
Treatment protocol unstimulated or stimulated with 10ng/ml IL-13
Growth protocol Freshly isolated human neutrophils
Extracted molecule polyA RNA
Extraction protocol Qiagen RNAeasy (#74104) kit protocol
Label Cy5
Label protocol Nugen Ovation V2, Nugen FL-Ovation cDNA Fluorescent Module
 
 
Hybridization protocol Standard Agilent protocol
Scan protocol Agilent Technologies Scanner G2505C - 5 microns per pixel
Description Biological replicate 3 of 3.
Data processing Agilent Feature extraction version GE2_105_Dec08
 
Submission date Aug 05, 2019
Last update date Mar 28, 2023
Contact name Ilkka Junttila
E-mail(s) ilkka.junttila@tuni.fi
Organization name University of Tampere
Department Institute of Medical and Life Science
Lab Cytokine biology
Street address Arvo Ylpön katu 34
City Tampere
State/province Tampere
ZIP/Postal code 33520
Country Finland
 
Platform ID GPL4133
Series (1)
GSE135426 Human neutrophils stimulated with IL-13.

Data table header descriptions
ID_REF
VALUE Normalized (loess for within array norm. and quantile for between array norm.)) log2 ratio (Cy5/Cy3).

Data table
ID_REF VALUE
12 -0.313277220186187
13 0.0111965787013588
14 -0.0384534599340842
15 -0.0841412380779749
16 0.0320643286014626
17 0.0451323931896139
18 -0.149654096781888
19 0.281123704591675
20 -0.158078474564629
21 -0.0301695174548886
22 0.0122080903158803
23 -0.108905882314979
24 -0.0857192641278939
25 0.148559229458849
26 -0.069965989710111
27 -0.117491858948819
28 -0.0353155296922054
29 -0.0170775580817404
30 0.197458123464799
31 -0.082779489452486

Total number of rows: 43376

Table truncated, full table size 1048 Kbytes.




Supplementary file Size Download File type/resource
GSM4008728_Hsha_251485034907_S01_GE2_105_Dec08_1_2.txt.gz 15.6 Mb (ftp)(http) TXT
Processed data included within Sample table

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