|
| Status |
Public on Sep 19, 2019 |
| Title |
BIBO_6y_genomic DNA [201530440060_R03C01] |
| Sample type |
genomic |
| |
|
| Source name |
buccal swab genomic DNA
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: buccal epithelial cells
gender: Male
age (days): 2184
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
QIAamp DNA Mini Kit.
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol.
|
| |
|
| Hybridization protocol |
gDNA was bisulphite converted using the Zymo EZ DNA methylation kit. Hybridized to the Infinium MethylationEPIC array.
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting.
|
| Description |
201530440060_R03C01
sample: 227
Normal buccal epithelial cells.
|
| Data processing |
GenomeStudio software V2-0-3.
Average Beta (after background-subtraction and colour-correction in GenomeStudio software according to standard Illumina protocol).
|
| |
|
| Submission date |
Sep 18, 2019 |
| Last update date |
Sep 19, 2019 |
| Contact name |
Michael S. Kobor |
| Organization name |
Centre for Molecular Medicine and Therapeutics / University of British Columbia
|
| Department |
Medical Genetics
|
| Lab |
Kobor
|
| Street address |
950 West 28th Avenue
|
| City |
Vancouver |
| State/province |
BC |
| ZIP/Postal code |
V5Z 4H4 |
| Country |
Canada |
| |
|
| Platform ID |
GPL21145 |
| Series (2) |
| GSE137503 |
The PedBE clock accurately estimates DNA methylation age in pediatric buccal cells |
| GSE137682 |
The PedBE clock accurately estimates DNA methylation age in pediatric buccal cells [dataset 8, BIBO] |
|
