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Sample GSM410894 Query DataSets for GSM410894
Status Public on Jun 01, 2010
Title fat_diet_lung_1711
Sample type RNA
 
Source name WT mouse high fat diet lung rep 1 (1711)
Organism Mus musculus
Characteristics tissue: lung
sample number: 1711
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy
Label biotin
Label protocol Affymetrix biotin
 
Hybridization protocol Affymetrix standard protocol
Scan protocol Affymetrix standard protocol
Description no additional information
Data processing MAS 5.0
 
Submission date Jun 01, 2009
Last update date Jun 02, 2009
Contact name Yuh-Chin Tony Huang
E-mail(s) huang002@mc.duke.edu
Phone 919-684-3069
Organization name Duke University Medical Center
Department Medicine
Lab Pulmonary and Critical Care
Street address Erwin Rd
City Durham
State/province NC
ZIP/Postal code 27710
Country USA
 
Platform ID GPL1261
Series (1)
GSE16377 wild type mouse lung control vs. high fat diet

Data table header descriptions
ID_REF
VALUE values
ABS_CALL abs call
DETECTION P-VALUE detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 576.742 P 0.000195116
AFFX-BioB-M_at 1071.04 P 4.42873e-05
AFFX-BioB-3_at 685.535 P 0.00010954
AFFX-BioC-5_at 1779.24 P 5.16732e-05
AFFX-BioC-3_at 1848.05 P 4.42873e-05
AFFX-BioDn-5_at 4372.41 P 4.42873e-05
AFFX-BioDn-3_at 6656.56 P 4.42873e-05
AFFX-CreX-5_at 23673.5 P 4.42873e-05
AFFX-CreX-3_at 27999.3 P 4.42873e-05
AFFX-DapX-5_at 2.10819 A 0.941588
AFFX-DapX-M_at 32.5791 A 0.205712
AFFX-DapX-3_at 6.95647 A 0.737173
AFFX-LysX-5_at 3.3198 A 0.760937
AFFX-LysX-M_at 5.85736 A 0.860518
AFFX-LysX-3_at 6.19448 A 0.544587
AFFX-PheX-5_at 4.85705 A 0.712257
AFFX-PheX-M_at 0.965749 A 0.987453
AFFX-PheX-3_at 28.5711 A 0.574038
AFFX-ThrX-5_at 1.76412 A 0.932322
AFFX-ThrX-M_at 17.3503 A 0.559354

Total number of rows: 45101

Table truncated, full table size 1390 Kbytes.




Supplementary file Size Download File type/resource
GSM410894.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM410894.CHP.gz 244.1 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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