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Sample GSM41311 Query DataSets for GSM41311
Status Public on Jun 30, 2006
Title WT_Gal_Air_6.2_Generations_Rep_3
Sample type RNA
 
Channel 1
Source name WT_Gal_Air_6.2_Generations_Rep_3
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
Channel 2
Source name WT_Gal_Air_Reference
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
 
Description Sparged, fermentor clutures of a yeast strain (JM43) were aerobically grown on galactose medium (SSG-TEA). At time zero (generation 0) the saprge gas was switched from air to O2-free N2 for 6 generations of anaerobic growth. After six generations, the saprge gas was switched back to air and samples were harvested at 6.2 generations. 30 µg of total RNA was reverse transcribed (Cy3) and hybridized against a reference (Cy5)under the same gas condition, which consisted of a pool of equal masses of RNA from each time point sampled. The data are background-corrected and normalized.
 
Submission date Feb 04, 2005
Last update date Aug 22, 2008
Contact name Kurt E Kwast
E-mail(s) kwast@uiuc.edu
Phone 217-244-3122
Organization name University of Illinois at Urbana-Champaign
Department Molecular & Integrative Physiology
Lab Kwast Lab
Street address 407 S. Goodwin Ave.
City Urbana
State/province IL
ZIP/Postal code 61801
Country USA
 
Platform ID GPL1535
Series (3)
GSE2246 JM43_Galactose_Air_N2_Air_Shift
GSE3705 JM43 cells grown aerobically in galactose and treated with Antimycin A
GSE3706 JM43_Galactose_N2_AntimycinA

Data table header descriptions
ID_REF
VALUE log2 Ratio

Data table
ID_REF VALUE
Q0045 0.044909252
Q0050 -0.089526217
Q0055 -0.086920088
Q0060 -0.162151611
Q0065 -0.670425996
Q0070 0.167998143
Q0075 0.076904397
Q0080 -0.045817543
Q0085 0.900389201
Q0105 0.052049624
Q0110 -0.423255604
Q0115 0.157772113
Q0120 0.218367839
Q0130 0.359103803
Q0140 0.376480859
Q0160 0.305073256
Q0250 0.402948471
Q0255 0.204213878
Q0275 0.259947595
YAL001C 0.055706512

Total number of rows: 5617

Table truncated, full table size 111 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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