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Sample GSM417268 Query DataSets for GSM417268
Status Public on Jun 01, 2010
Title Testis vs. Stromal-vascular fraction of adipose tissue 345544
Sample type RNA
 
Channel 1
Source name Stromal-vascular fraction
Organism Mus musculus
Characteristics tissue: Stromal-vascular fraction of adipose tissue
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy3
Label protocol Ambion
 
Channel 2
Source name testis
Organism Mus musculus
Characteristics tissue: testis
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol Agilent : 750.0 ng at 62 degree_C during 17 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description Testis vs. Stromal-vascular fraction of adipose tissue
Date:2008/09/18
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 15, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16613 Comparison between stromal vascular fraction of adipose tissue, testis and epididymis in mouse

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 0.175202916306545
24666 -1.09229718053231
21331 -0.23776908138899
24642 0.509336174221169
21307 -1.84490398767121
24618 0.794286575523229
21283 0.00838593726582548
24594 0.463000847142357
21259 0.1869196038075
24570 -4.48108540295917
21235 -0.818305768833818
24546 -2.29291171671219
21211 2.19849310982462
24522 -0.75705128393334
21187 -1.7077206072815
21163 5.04406573229102
21139 0.0243611593564488
13398 -1.33868453175288
13374 0.0736968084059662
13350 -1.31709227521518

Total number of rows: 25344

Table truncated, full table size 582 Kbytes.




Supplementary file Size Download File type/resource
GSM417268.gpr.gz 2.3 Mb (ftp)(http) GPR
Processed data included within Sample table

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