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Sample GSM417270 Query DataSets for GSM417270
Status Public on Jun 01, 2010
Title Stromal-vascular fraction of adipose tissue vs. Testis 345549
Sample type RNA
 
Channel 1
Source name testis
Organism Mus musculus
Characteristics tissue: testis
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy3
Label protocol Ambion
 
Channel 2
Source name Stromal-vascular fraction
Organism Mus musculus
Characteristics tissue: Stromal-vascular fraction of adipose tissue
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol Agilent : 750.0 ng at 62 degree_C during 17 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description Stromal-vascular fraction of adipose tissue vs. Testis
Date:2008/09/18
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 15, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16613 Comparison between stromal vascular fraction of adipose tissue, testis and epididymis in mouse

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 -1.13311968299411
24666 -0.0697087101192047
21331 -0.548089120744705
24642 -1.48620754938039
21307 2.48400320722799
24618 -1.01162710168963
21283 -0.518717063234575
24594 -0.0625461932497782
21259 -0.616885865863988
24570 5.2225777763869
21235 0.86985584277391
24546 1.59333902370116
21211 -2.3855004428138
24522 0.831874387204866
21187 1.16639465349302
21163 -4.61442930911392
21139 0.0724484932224074
13398 1.24238661097501
13374 0.416827816537976
13350 2.73624389415464

Total number of rows: 25344

Table truncated, full table size 582 Kbytes.




Supplementary file Size Download File type/resource
GSM417270.gpr.gz 2.3 Mb (ftp)(http) GPR
Processed data included within Sample table

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