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Sample GSM417273 Query DataSets for GSM417273
Status Public on Jun 01, 2010
Title Stromal-vascular fraction of adipose tissue vs. Epididymis 345355
Sample type RNA
 
Channel 1
Source name epididymis
Organism Mus musculus
Characteristics tissue: epididymis
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy3
Label protocol Ambion
 
Channel 2
Source name Stromal-vascular fraction
Organism Mus musculus
Characteristics tissue: Stromal-vascular fraction of adipose tissue
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol Agilent : 750.0 ng at 62 degree_C during 17 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description Stromal-vascular fraction of adipose tissue vs. Epididymis
Date:2008/09/18
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 15, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16613 Comparison between stromal vascular fraction of adipose tissue, testis and epididymis in mouse

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 -1.08730309419827
24666 0.447447921249345
21331 0.0668899023607423
24642 -1.08008567999656
21307 -0.0247058863264211
24618 0.0284983045995144
21283 -2.18596888106302
24594 0.14110570601863
21259 -1.00787896521068
24570 5.67136690843024
21235 0.0255365016653446
24546 0.79741985534528
21211 -0.563877288181172
24522 1.01171476601963
21187 0.216962048293293
21163 -1.72190289725874
21139 0.0604021928027221
13398 0.569048528752415
13374 -0.292311737987511
13350 2.08978217929798

Total number of rows: 25344

Table truncated, full table size 586 Kbytes.




Supplementary file Size Download File type/resource
GSM417273.gpr.gz 2.3 Mb (ftp)(http) GPR
Processed data included within Sample table

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