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Sample GSM417657 Query DataSets for GSM417657
Status Public on Jun 01, 2010
Title HF1 vs. HF1-REV 309315
Sample type RNA
 
Channel 1
Source name HF1
Organism Mus musculus
Characteristics subject: HF1
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy3
Label protocol Ambion
 
Channel 2
Source name HF1-REV
Organism Mus musculus
Characteristics subject: HF1-REV
tissue: epididymal fat
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol Agilent : 750.0 ng at 62 degree_C during 16 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description HF1 vs HF1-REV
Date:2007/06/21
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 16, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16636 A human-like fat diet is sufficient to induce transgenerational obesity

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 -0.146070758550788
24666 -0.242578461304216
21331 -0.547616635009039
24642 -1.16240211656138
21307 0.20132561395098
24618 -0.25146508667769
21283 -0.483582861764019
24594 -0.0156850690396482
21259 0.218246156352647
24570 -0.240321900017769
21235 0.0508034878407138
24546 0.463132452496525
21211 -0.369856299992529
24522 0.117981142517822
21187 0.092567439760387
21163 0.170108392850224
21139 -0.0486083552218854
13398 0.528182365109078
13374 0.170845958480472
13350 0.982309433454615

Total number of rows: 25344

Table truncated, full table size 597 Kbytes.




Supplementary file Size Download File type/resource
GSM417657.gpr.gz 2.3 Mb (ftp)(http) GPR
Processed data included within Sample table

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