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Sample GSM417658 Query DataSets for GSM417658
Status Public on Jun 01, 2010
Title HF0 vs. STD 309314
Sample type RNA
 
Channel 1
Source name HF0
Organism Mus musculus
Characteristics subject: HF0
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy3
Label protocol Ambion
 
Channel 2
Source name STD
Organism Mus musculus
Characteristics subject: STD
tissue: epididymal fat
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol Agilent : 750.0 ng at 62 degree_C during 16 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description HF0 vs STD
Date:2007/06/21
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 16, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16636 A human-like fat diet is sufficient to induce transgenerational obesity

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 0.303809283160039
24666 -0.22559651076932
21331 0.915423341033323
24642 0.535848910392335
21307 0.44610437074825
24618 -0.0340132890787483
21283 -0.479784237032456
24594 0.247647909850643
21259 -0.347087972953915
24570 -1.36832085463947
21235 -0.521399419905292
24546 -0.207107806262952
21211 -1.3091880109321
24522 0.0808810699268694
21187 -0.957968618919356
21163 1.74580871788135
21139 -0.606533228573731
13398 0.546041456173036
13374 0.00553132463284278
13350 0.688679518869032

Total number of rows: 25344

Table truncated, full table size 594 Kbytes.




Supplementary file Size Download File type/resource
GSM417658.gpr.gz 2.2 Mb (ftp)(http) GPR
Processed data included within Sample table

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