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Sample GSM417660 Query DataSets for GSM417660
Status Public on Jun 01, 2010
Title STD vs. HF0 17534
Sample type RNA
 
Channel 1
Source name STD
Organism Mus musculus
Characteristics subject: STD
tissue: epididymal fat
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy3
Label protocol Ambion
 
Channel 2
Source name HF0
Organism Mus musculus
Characteristics subject: HF0
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol CGH-Agilent-4rpm : 750.0 ng at 62 degree_C during 17 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description STD vs HF0
Date:2006/10/10
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 16, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16636 A human-like fat diet is sufficient to induce transgenerational obesity

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 0.020928012416185
24666 -0.293495970094293
21331 -0.250244143316166
24642 -0.631661753663124
21307 0.302809948817021
24618 -0.0931021524755664
21283 -0.432437304109481
24594 0.0205086042102369
21259 -0.383653678781853
24570 0.101422628376014
21235 0.224995073899779
24546 0.0570658555613299
21211 -0.0318574149535582
24522 -0.392525381132261
21187 -0.447491056122344
21163 0.690074542168746
21139 -0.0861705371601644
13398 0.365012775606258
13374 -0.0174343877812806
13350 0.449818091450558

Total number of rows: 25344

Table truncated, full table size 600 Kbytes.




Supplementary file Size Download File type/resource
GSM417660.gpr.gz 2.2 Mb (ftp)(http) GPR
Processed data included within Sample table

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