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Sample GSM417661 Query DataSets for GSM417661
Status Public on Jun 01, 2010
Title HF0 vs. STD 17535
Sample type RNA
 
Channel 1
Source name HF0
Organism Mus musculus
Characteristics subject: HF0
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy3
Label protocol Ambion
 
Channel 2
Source name STD
Organism Mus musculus
Characteristics subject: STD
tissue: epididymal fat
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol CGH-Agilent-4rpm : 750.0 ng at 62 degree_C during 17 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description HF0 vs STD
Date:2006/10/10
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 16, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16636 A human-like fat diet is sufficient to induce transgenerational obesity

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 -0.541632466641818
24666 -0.202987241643134
21331 -0.463238106409968
24642 -0.79135076150076
21307 -0.118950068250113
24618 -0.330339351712126
21283 -0.392255915851315
24594 -0.126605672372726
21259 0.0113757663990928
24570 0.650468378239982
21235 0.373799912210339
24546 -0.0873824505153156
21211 0.194154814125259
24522 0.109045927261878
21187 0.600663931243814
21163 -0.339158426553883
21139 -0.185985889205735
13398 -0.0547579187730847
13374 0.0674170004253245
13350 -0.353056896548305

Total number of rows: 25344

Table truncated, full table size 597 Kbytes.




Supplementary file Size Download File type/resource
GSM417661.gpr.gz 2.3 Mb (ftp)(http) GPR
Processed data included within Sample table

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