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Sample GSM417662 Query DataSets for GSM417662
Status Public on Jun 01, 2010
Title HF4 vs. HF3 17537
Sample type RNA
 
Channel 1
Source name HF4
Organism Mus musculus
Characteristics subject: HF4
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy3
Label protocol Ambion
 
Channel 2
Source name HF3
Organism Mus musculus
Characteristics subject: HF3
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol CGH-Agilent-4rpm : 750.0 ng at 62 degree_C during 17 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description HF4 vs HF3
Date:2006/10/10
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 16, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16636 A human-like fat diet is sufficient to induce transgenerational obesity

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 -0.463604674535736
24666 -0.284469438224027
21331 -0.063638591179803
24642 -0.528408930966075
21307 0.306104541827123
24618 -0.202506865586182
21283 -0.325524976579191
24594 0.296812594170587
21259 0.256320607743785
24570 0.243698784968998
21235 0.432646781153402
24546 0.113346276414758
21211 0.0413938239631211
24522 0.183111775731819
21187 0.184778838579044
21163 -1.3448199822578
21139 -0.102654869027422
13398 0.400250203495638
13374 -0.178714101848934
13350 0.279140606281345

Total number of rows: 25344

Table truncated, full table size 597 Kbytes.




Supplementary file Size Download File type/resource
GSM417662.gpr.gz 2.3 Mb (ftp)(http) GPR
Processed data included within Sample table

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