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Sample GSM417663 Query DataSets for GSM417663
Status Public on Jun 01, 2010
Title HF3 vs. HF0 17649
Sample type RNA
 
Channel 1
Source name HF3
Organism Mus musculus
Characteristics subject: HF3
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy3
Label protocol Ambion
 
Channel 2
Source name HF0
Organism Mus musculus
Characteristics subject: HF0
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol CGH-Agilent-4rpm : 750.0 ng at 62 degree_C during 17 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description HF3 vs HF0
Date:2006/10/10
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 16, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16636 A human-like fat diet is sufficient to induce transgenerational obesity

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 -0.578546340275413
24666 -0.735851303614815
21331 -0.31490287061904
24642 -0.850073906747527
21307 0.899262644129069
24618 -0.448786910204467
21283 -0.644843220889387
24594 0.08623587527355
21259 -0.18058727424021
24570 0.869921382242897
21235 0.630128018578658
24546 0.362563261631189
21211 -0.136900818778557
24522 0.194282578577898
21187 0.221911594105411
21163 -2.66971797368621
21139 -0.379899472514923
13398 0.680955148494881
13374 0.0892613560940134
13350 0.128916422487565

Total number of rows: 25344

Table truncated, full table size 593 Kbytes.




Supplementary file Size Download File type/resource
GSM417663.gpr.gz 2.3 Mb (ftp)(http) GPR
Processed data included within Sample table

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