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Sample GSM417665 Query DataSets for GSM417665
Status Public on Jun 01, 2010
Title HF4 vs. HF0 312409
Sample type RNA
 
Channel 1
Source name HF4
Organism Mus musculus
Characteristics subject: HF4
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy3
Label protocol Ambion
 
Channel 2
Source name HF0
Organism Mus musculus
Characteristics subject: HF0
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol Agilent : 750.0 ng at 62 degree_C during 16 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description HF4 vs HF0
Date:2007/06/29
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 16, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16636 A human-like fat diet is sufficient to induce transgenerational obesity

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 -0.168703792286665
24666 -0.736064773381228
21331 -0.3469086338662
24642 0.251156809022245
21307 0.674954207224562
24618 -0.431626410824739
21283 -0.498633359336903
24594 -0.219846747514611
21259 -0.125966410758915
24570 0.77578434647041
21235 -0.0637040702299991
24546 0.547820870705218
21211 -0.5323069228896
24522 3.51936019416854E-4
21187 -0.340581427212443
21163 -2.84321321229351
21139 -0.229176111955638
13398 0.743292859068118
13374 0.103023721149619
13350 0.650437177764889

Total number of rows: 25344

Table truncated, full table size 592 Kbytes.




Supplementary file Size Download File type/resource
GSM417665.gpr.gz 2.2 Mb (ftp)(http) GPR
Processed data included within Sample table

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