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Sample GSM417666 Query DataSets for GSM417666
Status Public on Jun 01, 2010
Title HF0 vs. HF4 312265
Sample type RNA
 
Channel 1
Source name HF0
Organism Mus musculus
Characteristics subject: HF0
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy3
Label protocol Ambion
 
Channel 2
Source name HF4
Organism Mus musculus
Characteristics subject: HF4
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol Agilent : 750.0 ng at 62 degree_C during 16 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description HF0 vs HF4
Date:2007/06/29
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 16, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16636 A human-like fat diet is sufficient to induce transgenerational obesity

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 -1.19951764417405
24666 -0.618298684577988
21331 -0.431221332521638
24642 -0.0971874850003136
21307 -0.389210136861296
24618 -0.456386430186061
21283 -0.82869763460752
24594 -0.230684700433793
21259 -0.323518836783807
24570 -0.102008537761201
21235 -0.510012730209329
24546 0.219094925292696
21211 -0.666392953239036
24522 -0.153426108249416
21187 -0.79326949312729
21163 3.03448331184054
21139 -0.391507425402619
13398 0.109584262108518
13374 -0.698443531237329
13350 -0.173468084782259

Total number of rows: 25344

Table truncated, full table size 595 Kbytes.




Supplementary file Size Download File type/resource
GSM417666.gpr.gz 2.2 Mb (ftp)(http) GPR
Processed data included within Sample table

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