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Sample GSM417667 Query DataSets for GSM417667
Status Public on Jun 01, 2010
Title STD vs. HF0 312408
Sample type RNA
 
Channel 1
Source name STD
Organism Mus musculus
Characteristics subject: STD
tissue: epididymal fat
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy3
Label protocol Ambion
 
Channel 2
Source name HF0
Organism Mus musculus
Characteristics subject: HF0
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol Agilent : 750.0 ng at 62 degree_C during 16 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description STD vs HF0
Date:2007/06/29
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 16, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16636 A human-like fat diet is sufficient to induce transgenerational obesity

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 -0.813029293086956
24666 -0.211730773912116
21331 -0.342341710761131
24642 -0.0566980214982511
21307 -0.464574657773161
24618 -0.483451435801896
21283 -0.523440529216561
24594 -0.235267494599936
21259 0.0372279429846571
24570 1.49667451010889
21235 -0.158477133244094
24546 0.916668882379533
21211 -0.00735569081075127
24522 -0.315896110996116
21187 0.136114723558281
21163 -1.83301964286081
21139 -0.0525989413193653
13398 0.30423622704812
13374 -0.250411148418975
13350 0.321304926957403

Total number of rows: 25344

Table truncated, full table size 594 Kbytes.




Supplementary file Size Download File type/resource
GSM417667.gpr.gz 2.2 Mb (ftp)(http) GPR
Processed data included within Sample table

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