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Sample GSM417669 Query DataSets for GSM417669
Status Public on Jun 01, 2010
Title HF4 vs. HF0 17721
Sample type RNA
 
Channel 1
Source name HF4
Organism Mus musculus
Characteristics subject: HF4
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy3
Label protocol Ambion
 
Channel 2
Source name HF0
Organism Mus musculus
Characteristics subject: HF0
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol CGH-Agilent-4rpm : 750.0 ng at 62 degree_C during 17 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description HF4 vs HF0
Date:2006/10/10
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 16, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16636 A human-like fat diet is sufficient to induce transgenerational obesity

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 -0.346380603460995
24666 -0.206227981732235
21331 -0.0056690634394787
24642 -0.744586518193474
21307 0.126647083931145
24618 -0.146574033686692
21283 -0.156427230800437
24594 0.209134181406545
21259 -0.0281165387572972
24570 0.724353847436586
21235 0.407447381769719
24546 0.490322943306648
21211 -0.218304488307053
24522 0.201970790329062
21187 -0.165611899010587
21163 -1.96247334446531
21139 0.00329163634778773
13398 0.236338670481308
13374 0.413325104593387
13350 0.16964088097974

Total number of rows: 25344

Table truncated, full table size 596 Kbytes.




Supplementary file Size Download File type/resource
GSM417669.gpr.gz 2.2 Mb (ftp)(http) GPR
Processed data included within Sample table

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