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Sample GSM417670 Query DataSets for GSM417670
Status Public on Jun 01, 2010
Title HF3 vs. HF4 17722
Sample type RNA
 
Channel 1
Source name HF3
Organism Mus musculus
Characteristics subject: HF3
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy3
Label protocol Ambion
 
Channel 2
Source name HF4
Organism Mus musculus
Characteristics subject: HF4
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol CGH-Agilent-4rpm : 750.0 ng at 62 degree_C during 17 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description HF3 vs HF4
Date:2006/10/10
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 16, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16636 A human-like fat diet is sufficient to induce transgenerational obesity

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 -0.142873998543129
24666 -0.202098242060428
21331 -0.260458131690234
24642 -0.595220232222331
21307 -0.0748893233218073
24618 -0.820906236227444
21283 0.553512226349078
24594 -0.106728052515274
21259 -0.233396879555514
24570 0.434426394277931
21235 0.151233938904571
24546 -0.0699162338212798
21211 0.0446348400716836
24522 -0.56333957099721
21187 -0.484593553428436
21163 1.55094685887591
21139 -0.0811335820098193
13398 -0.00194732175332035
13374 0.00819520079174119
13350 -0.148336075635072

Total number of rows: 25344

Table truncated, full table size 599 Kbytes.




Supplementary file Size Download File type/resource
GSM417670.gpr.gz 2.3 Mb (ftp)(http) GPR
Processed data included within Sample table

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