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Sample GSM417672 Query DataSets for GSM417672
Status Public on Jun 01, 2010
Title STD vs. HF3 16505
Sample type RNA
 
Channel 1
Source name STD
Organism Mus musculus
Characteristics subject: STD
tissue: epididymal fat
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy3
Label protocol Ambion
 
Channel 2
Source name HF3
Organism Mus musculus
Characteristics subject: HF3
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol CGH-Agilent-4rpm : 750.0 ng at 62 degree_C during 17 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description STD vs HF3
Date:2006/10/10
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 16, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16636 A human-like fat diet is sufficient to induce transgenerational obesity

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 -0.214775004874394
24666 0.301315905751945
21331 -0.364502163485525
24642 -0.677348059821371
21307 -0.143200365965102
24618 -0.235939199793687
21283 -0.23398620162356
24594 -0.17880395885698
21259 -0.13990283642203
24570 1.55933435001532
21235 0.250028262004411
24546 0.0465054428420295
21211 0.00985009393177627
24522 -0.0212508776074767
21187 -0.105230979698232
21163 -0.116907935191378
21139 -0.176061430110474
13398 0.0920195009820226
13374 0.318228205324367
13350 -0.225490004374588

Total number of rows: 25344

Table truncated, full table size 599 Kbytes.




Supplementary file Size Download File type/resource
GSM417672.gpr.gz 2.2 Mb (ftp)(http) GPR
Processed data included within Sample table

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