NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM417675 Query DataSets for GSM417675
Status Public on Jun 01, 2010
Title HF1 vs. HF3 40931
Sample type RNA
 
Channel 1
Source name HF1
Organism Mus musculus
Characteristics subject: HF1
tissue: epididymal fat
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy3
Label protocol Ambion
 
Channel 2
Source name HF3
Organism Mus musculus
Characteristics subject: HF3
tissue: epididymal fat
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol Agilent : 750.0 ng at 62 degree_C during 16 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description HF1 vs HF3
Date:2007/06/20
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 16, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16636 A human-like fat diet is sufficient to induce transgenerational obesity

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 -0.133370912240478
24666 0.06403435091425
21331 0.595849294358628
24642 -0.472259885590246
21307 -0.326253868527205
24618 0.208028142832188
21283 -0.0821793579915067
24594 0.177967754301093
21259 -0.0868788532042881
24570 -0.149249266061105
21235 -0.296612981134553
24546 0.270526163580016
21211 -0.2638275778775
24522 0.13389431022842
21187 -0.285886346557799
21163 1.55324906913718
21139 0.0454144140626269
13398 0.324590965343694
13374 -0.141476279356754
13350 0.931033997055154

Total number of rows: 25344

Table truncated, full table size 596 Kbytes.




Supplementary file Size Download File type/resource
GSM417675.gpr.gz 2.3 Mb (ftp)(http) GPR
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap