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Sample GSM417676 Query DataSets for GSM417676
Status Public on Jun 01, 2010
Title HF0 vs. HF3 40929
Sample type RNA
 
Channel 1
Source name HF0
Organism Mus musculus
Characteristics subject: HF0
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy3
Label protocol Ambion
 
Channel 2
Source name HF3
Organism Mus musculus
Characteristics subject: HF3
tissue: epididymal fat
diet: high fat diet
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy5
Label protocol Ambion
 
 
Hybridization protocol Agilent : 750.0 ng at 62 degree_C during 16 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description HF0 vs HF3
Date:2007/06/20
Data processing Interslide norm. : vsn, Intraslide norm. : none, Background norm. : none, Software used : rscript --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 16, 2009
Last update date Jun 23, 2009
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL1476
Series (1)
GSE16636 A human-like fat diet is sufficient to induce transgenerational obesity

Data table header descriptions
ID_REF
VALUE VSN normalized log2(635/532)

Data table
ID_REF VALUE
24690 0.133019547517467
24666 -0.353509607878578
21331 -0.628248549513049
24642 0.146397549618552
21307 -0.594891742522012
24618 -0.284624975041575
21283 -0.823369864677188
24594 -0.0158689243290571
21259 0.430951614152217
24570 0.1458406292926
21235 -0.915811820646976
24546 0.407648760509444
21211 -0.894114735498626
24522 0.407613994193747
21187 -0.0368237497780779
21163 1.04890575923567
21139 -0.967907072724385
13398 -0.137975394195486
13374 -0.487386537299987
13350 0.130613453676068

Total number of rows: 25344

Table truncated, full table size 593 Kbytes.




Supplementary file Size Download File type/resource
GSM417676.gpr.gz 2.3 Mb (ftp)(http) GPR
Processed data included within Sample table

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