|
| Status |
Public on Nov 18, 2020 |
| Title |
diffuse glioma_HD_part2_001 |
| Sample type |
genomic |
| |
|
| Source name |
diffuse glioma IDH wt
|
| Organism |
Homo sapiens |
| Characteristics |
subject status: patient with glioblastoma
gender: male
tissue/sample type: tumor_DNA_FFPE
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted and pruified from FFPE tissue according with the Maxwell 16 FFPE Plus LEV DNA Kit according to standard instructions
|
| Label |
Cy3 and Cy5
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite conerted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation 450k or EPIC Beadchip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Description |
HD_part2_001
|
| Data processing |
BeadStudio software v3.2
|
| |
|
| Submission date |
Jan 16, 2020 |
| Last update date |
Nov 18, 2020 |
| Contact name |
Tobias Kessler |
| Organization name |
DKFZ
|
| Street address |
Im Neuenheimer Feld 280
|
| City |
Heidelberg |
| ZIP/Postal code |
69120 |
| Country |
Germany |
| |
|
| Platform ID |
GPL13534 |
| Series (2) |
| GSE143842 |
Methylome analyses of three glioblastoma cohorts reveal chemotherapy sensitivity markers within DDR genes [Heidelberg cohort part 2] |
| GSE143843 |
Methylome analyses of three glioblastoma cohorts reveal chemotherapy sensitivity markers within DDR genes |
|
