GEO help: Mouse over screen elements for information.
Status
Public on Jun 02, 2005
Title
DEHP 168hr Veh1
Sample type
RNA
Source name
Liver
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
Male SD rats were given a single dose of distilled water as a vehicle. Animal was sacrificed 168hrs post-dosing. Total RNA was extracted using the RNA STAT-60 kit from Tel-Test inc. Approximately 10ug of RNA was labeled according to the standard Affymetrix protocol. Signal values were calculated using the MAS 5.0 algorithm, with global scaling to 1500
Submission date
Feb 21, 2005
Last update date
Jun 02, 2005
Contact name
Keith M Goldstein
E-mail(s)
goldsteinkm@lilly.com Organization name
Eli Lilly & Co.
Department
Investigative Toxicology
Lab
Keith Goldstein
Street address
Lilly Corporate Center
City
Indianapolis
State/province
IN
ZIP/Postal code
46285
Country
USA
Platform ID
GPL85 Series (1)
GSE2303 Rat liver response to Clofibrate, DEHP or VPA
Data table header descriptions ID_REF Affymetrix probeset ID
VALUE Signal from MAS5 with global scaling to 1500
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE rc_AA799636_at
257.35257
P
0.019304
rc_AA859777_f_at
134.967087
A
0.378184
U15280_at
44.587189
A
0.88284
AF001953_at
174.236389
A
0.418069
U15425_at
98.369179
A
0.284747
rc_AA893933_at
440.158112
A
0.397994
rc_AI639320_at
233.703537
A
0.138765
X66870_at
1383.24585
P
0.024711
rc_AA891965_at
604.264221
P
0.035163
M75148_at
352.455475
A
0.458816
rc_AA944007_g_at
9808.072266
P
0.000266
M94548_at
32559.75977
P
0.000219
rc_AI638941_at
16.907827
A
0.964837
X90475cds_at
143.148071
A
0.561639
U25651_at
563.910522
P
0.031336
rc_AA875146_s_at
4688.258301
P
0.002617
S35751_f_at
4142.455078
P
0.000468
rc_AA800768_at
104.689522
M
0.05447
rc_AI230789_at
9.881968
A
0.892699
X75785_at
81.508858
P
0.02786
8799 301 Kbytes .Supplementary file Size Download File type/resource GSM42884.CEL.gz
1.9 Mb
(ftp) (http) CEL
GSM42884.CHP.gz
2.9 Mb
(ftp) (http) CHP
GSM42884.EXP.gz
504 b
(ftp) (http) EXP
Processed data provided as supplementary file
