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Status
Public on Jun 02, 2005
Title
VPA 168hr Veh2
Sample type
RNA
Source name
Liver
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
Male SD rats were given a single dose of distilled water as a vehicle. Animal was sacrificed 168hrs post-dosing. Total RNA was extracted using the RNA STAT-60 kit from Tel-Test inc. Approximately 10ug of RNA was labeled according to the standard Affymetrix protocol. Signal values were calculated using the MAS 5.0 algorithm, with global scaling to 1500
Submission date
Feb 22, 2005
Last update date
Jun 02, 2005
Contact name
Keith M Goldstein
E-mail(s)
goldsteinkm@lilly.com Organization name
Eli Lilly & Co.
Department
Investigative Toxicology
Lab
Keith Goldstein
Street address
Lilly Corporate Center
City
Indianapolis
State/province
IN
ZIP/Postal code
46285
Country
USA
Platform ID
GPL85 Series (1)
GSE2303 Rat liver response to Clofibrate, DEHP or VPA
Data table header descriptions ID_REF Affymetrix probeset ID
VALUE Signal from MAS5 with global scaling to 1500
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE rc_AA799636_at
248.240082
P
0.009985
rc_AA859777_f_at
28.581585
A
0.67917
U15280_at
37.483875
A
0.837065
AF001953_at
359.081818
A
0.138765
U15425_at
144.260849
A
0.284747
rc_AA893933_at
416.154236
A
0.35869
rc_AI639320_at
128.701462
A
0.175989
X66870_at
1393.545166
P
0.021866
rc_AA891965_at
773.734924
P
0.031336
M75148_at
502.768097
A
0.32083
rc_AA944007_g_at
7440.939453
P
0.000322
M94548_at
26670.19922
P
0.000219
rc_AI638941_at
9.611166
A
0.983
X90475cds_at
90.255936
A
0.302547
U25651_at
591.063049
P
0.017001
rc_AA875146_s_at
3235.249756
P
0.000673
S35751_f_at
8228.183594
P
0.000266
rc_AA800768_at
221.656387
P
0.001141
rc_AI230789_at
23.236397
A
0.64131
X75785_at
101.041153
P
0.011447
8799 300 Kbytes .Supplementary file Size Download File type/resource GSM42897.CEL.gz
2.0 Mb
(ftp) (http) CEL
GSM42897.CHP.gz
3.1 Mb
(ftp) (http) CHP
GSM42897.EXP.gz
503 b
(ftp) (http) EXP
Processed data provided as supplementary file
