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Status
Public on Jun 02, 2005
Title
Clof 4hr treated2
Sample type
RNA
Source name
Liver
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
Male SD rats were given a single dose of 1000mg/kg clofibrate using 0.9% saline as vehicle. Animal was sacrificed 4hrs post-dosing. Total RNA was extracted using the RNA STAT-60 kit from Tel-Test inc. Approximately 10ug of RNA was labeled according to the standard Affymetrix protocol. Signal values were calculated using the MAS 5.0 algorithm, with global scaling to 1500.
Submission date
Feb 22, 2005
Last update date
Jun 02, 2005
Contact name
Keith M Goldstein
E-mail(s)
goldsteinkm@lilly.com Organization name
Eli Lilly & Co.
Department
Investigative Toxicology
Lab
Keith Goldstein
Street address
Lilly Corporate Center
City
Indianapolis
State/province
IN
ZIP/Postal code
46285
Country
USA
Platform ID
GPL85 Series (1)
GSE2303 Rat liver response to Clofibrate, DEHP or VPA
Data table header descriptions ID_REF Affymetrix probeset ID
VALUE Signal from MAS5 with global scaling to 1500
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE rc_AA799636_at
88.537956
A
0.234557
rc_AA859777_f_at
45.871395
A
0.660442
U15280_at
46.927334
A
0.715253
AF001953_at
404.111511
A
0.162935
U15425_at
98.548325
A
0.234557
rc_AA893933_at
184.294113
A
0.458816
rc_AI639320_at
138.083176
A
0.162935
X66870_at
1137.584839
P
0.035163
rc_AA891965_at
575.528381
A
0.107301
M75148_at
430.825256
A
0.458816
rc_AA944007_g_at
7116.974121
P
0.000266
M94548_at
19695.96094
P
0.000219
rc_AI638941_at
15.972913
A
0.964837
X90475cds_at
27.155699
A
0.810313
U25651_at
555.067383
P
0.013092
rc_AA875146_s_at
4320.214844
P
0.003067
S35751_f_at
2330.920898
P
0.000219
rc_AA800768_at
106.575371
P
0.014937
rc_AI230789_at
46.807171
A
0.581931
X75785_at
75.729111
M
0.048967
8799 300 Kbytes .Supplementary file Size Download File type/resource GSM42953.CEL.gz
1.8 Mb
(ftp) (http) CEL
GSM42953.CHP.gz
2.8 Mb
(ftp) (http) CHP
GSM42953.EXP.gz
501 b
(ftp) (http) EXP
Processed data provided as supplementary file
