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Status
Public on Jun 02, 2005
Title
Clof 4hr treated3
Sample type
RNA
Source name
Liver
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
Male SD rats were given a single dose of 1000mg/kg clofibrate using 0.9% saline as vehicle. Animal was sacrificed 4hrs post-dosing. Total RNA was extracted using the RNA STAT-60 kit from Tel-Test inc. Approximately 10ug of RNA was labeled according to the standard Affymetrix protocol. Signal values were calculated using the MAS 5.0 algorithm, with global scaling to 1500.
Submission date
Feb 22, 2005
Last update date
Jun 02, 2005
Contact name
Keith M Goldstein
E-mail(s)
goldsteinkm@lilly.com Organization name
Eli Lilly & Co.
Department
Investigative Toxicology
Lab
Keith Goldstein
Street address
Lilly Corporate Center
City
Indianapolis
State/province
IN
ZIP/Postal code
46285
Country
USA
Platform ID
GPL85 Series (1)
GSE2303 Rat liver response to Clofibrate, DEHP or VPA
Data table header descriptions ID_REF Affymetrix probeset ID
VALUE Signal from MAS5 with global scaling to 1500
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE rc_AA799636_at
14.747731
A
0.52062
rc_AA859777_f_at
101.973129
A
0.660442
U15280_at
166.270065
A
0.5
AF001953_at
138.581406
A
0.458816
U15425_at
63.491268
A
0.397994
rc_AA893933_at
183.659103
A
0.397994
rc_AI639320_at
125.934776
A
0.127645
X66870_at
1114.138428
P
0.035163
rc_AA891965_at
359.852631
A
0.098054
M75148_at
450.138977
A
0.267463
rc_AA944007_g_at
6593.501465
P
0.000266
M94548_at
17021.36328
P
0.000219
rc_AI638941_at
20.973841
A
0.939581
X90475cds_at
54.904388
A
0.64131
U25651_at
527.565796
P
0.006532
rc_AA875146_s_at
3191.502197
P
0.002617
S35751_f_at
4303.353516
P
0.000388
rc_AA800768_at
44.07238
A
0.107301
rc_AI230789_at
34.813095
A
0.715253
X75785_at
89.728279
P
0.024711
8799 300 Kbytes .Supplementary file Size Download File type/resource GSM42954.CEL.gz
1.8 Mb
(ftp) (http) CEL
GSM42954.CHP.gz
2.8 Mb
(ftp) (http) CHP
GSM42954.EXP.gz
500 b
(ftp) (http) EXP
Processed data provided as supplementary file
