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Status
Public on Jun 02, 2005
Title
Clof 24hr treated3
Sample type
RNA
Source name
Liver
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
Male SD rats were given a single dose of 1000mg/kg clofibrate using 0.9% saline as vehicle. Animal was sacrificed 24hrs post-dosing. Total RNA was extracted using the RNA STAT-60 kit from Tel-Test inc. Approximately 10ug of RNA was labeled according to the standard Affymetrix protocol. Signal values were calculated using the MAS 5.0 algorithm, with global scaling to 1500.
Submission date
Feb 22, 2005
Last update date
Jun 02, 2005
Contact name
Keith M Goldstein
E-mail(s)
goldsteinkm@lilly.com Organization name
Eli Lilly & Co.
Department
Investigative Toxicology
Lab
Keith Goldstein
Street address
Lilly Corporate Center
City
Indianapolis
State/province
IN
ZIP/Postal code
46285
Country
USA
Platform ID
GPL85 Series (1)
GSE2303 Rat liver response to Clofibrate, DEHP or VPA
Data table header descriptions ID_REF Affymetrix probeset ID
VALUE Signal from MAS5 with global scaling to 1500
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-MurIL2_at
33.1
A
0.9273
AFFX-MurIL10_at
27.8
A
0.883887
AFFX-MurIL4_at
13.1
A
0.99238
AFFX-MurFAS_at
37.9
A
0.876428
AFFX-BioB-5_at
3102.9
P
0.001796
AFFX-BioB-M_at
8211.9
P
0.00006
AFFX-BioB-3_at
2808.8
P
0.000044
AFFX-BioC-5_at
10555.7
P
0.00006
AFFX-BioC-3_at
7612.5
P
0.000052
AFFX-BioDn-5_at
8223.7
P
0.00039
AFFX-BioDn-3_at
38498.2
P
0.000052
AFFX-CreX-5_at
77531.2
P
0.000044
AFFX-CreX-3_at
100465.5
P
0.000044
AFFX-BioB-5_st
313.3
A
0.185131
AFFX-BioB-M_st
414.1
A
0.300606
AFFX-BioB-3_st
77.4
A
0.772364
AFFX-BioC-5_st
86.3
A
0.852061
AFFX-BioC-3_st
28.8
A
0.891021
AFFX-BioDn-5_st
650.7
A
0.216524
AFFX-BioDn-3_st
816.9
M
0.050229
8799 256 Kbytes .Supplementary file Size Download File type/resource GSM42958.CEL.gz
1.8 Mb
(ftp) (http) CEL
GSM42958.CHP.gz
2.8 Mb
(ftp) (http) CHP
GSM42958.EXP.gz
500 b
(ftp) (http) EXP
Processed data provided as supplementary file
