GEO help: Mouse over screen elements for information.
Status
Public on Jun 02, 2005
Title
DEHP 168hr treated POOLED
Sample type
RNA
Source name
Liver
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
Male SD rats were given a single dose of 20g/kg DEHP in distilled water as vehicle. Animal was sacrificed 168hrs post-dosing. Total RNA was extracted using the RNA STAT-60 kit from Tel-Test inc. Approximately 2ug of RNA from each sample was pooled (10ug total) and labeled according to the standard Affymetrix protocol. Signal values were calculated using the MAS 5.0 algorithm, with global scaling to 1500
Submission date
Feb 22, 2005
Last update date
Jun 02, 2005
Contact name
Keith M Goldstein
E-mail(s)
goldsteinkm@lilly.com Organization name
Eli Lilly & Co.
Department
Investigative Toxicology
Lab
Keith Goldstein
Street address
Lilly Corporate Center
City
Indianapolis
State/province
IN
ZIP/Postal code
46285
Country
USA
Platform ID
GPL85 Series (1)
GSE2303 Rat liver response to Clofibrate, DEHP or VPA
Data table header descriptions ID_REF Affymetrix probeset ID
VALUE Signal from MAS5 with global scaling to 1500
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-MurIL2_at
29.7
A
0.891021
AFFX-MurIL10_at
38.2
A
0.794268
AFFX-MurIL4_at
81.4
A
0.659339
AFFX-MurFAS_at
30.4
A
0.631562
AFFX-BioB-5_at
718.1
A
0.095667
AFFX-BioB-M_at
2078.4
P
0.00141
AFFX-BioB-3_at
1080.9
P
0.00844
AFFX-BioC-5_at
3534.6
P
0.000258
AFFX-BioC-3_at
1884
P
0.000169
AFFX-BioDn-5_at
2414.9
P
0.002023
AFFX-BioDn-3_at
16157.1
P
0.000147
AFFX-CreX-5_at
34951.4
P
0.000044
AFFX-CreX-3_at
57908
P
0.000044
AFFX-BioB-5_st
524.2
A
0.205732
AFFX-BioB-M_st
580.1
A
0.382599
AFFX-BioB-3_st
122
A
0.834139
AFFX-BioC-5_st
95.2
A
0.883887
AFFX-BioC-3_st
22
A
0.941556
AFFX-BioDn-5_st
936.4
A
0.147939
AFFX-BioDn-3_st
482
A
0.108979
8799 257 Kbytes .Supplementary file Size Download File type/resource GSM42965.CEL.gz
2.0 Mb
(ftp) (http) CEL
GSM42965.CHP.gz
3.0 Mb
(ftp) (http) CHP
GSM42965.EXP.gz
505 b
(ftp) (http) EXP
Processed data provided as supplementary file
