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Status
Public on Jun 02, 2005
Title
Clof 168hr Veh4
Sample type
RNA
Source name
Liver
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
Male SD rats were given a single dose of 0.9% saline as a vehicle. Animal was sacrificed 168hrs post-dosing. Total RNA was extracted using the RNA STAT-60 kit from Tel-Test inc. Approximately 10ug of RNA was labeled according to the standard Affymetrix protocol. Signal values were calculated using the MAS 5.0 algorithm, with global scaling to 1500.
Submission date
Feb 22, 2005
Last update date
Jun 02, 2005
Contact name
Keith M Goldstein
E-mail(s)
goldsteinkm@lilly.com Organization name
Eli Lilly & Co.
Department
Investigative Toxicology
Lab
Keith Goldstein
Street address
Lilly Corporate Center
City
Indianapolis
State/province
IN
ZIP/Postal code
46285
Country
USA
Platform ID
GPL85 Series (1)
GSE2303 Rat liver response to Clofibrate, DEHP or VPA
Data table header descriptions ID_REF Affymetrix probeset ID
VALUE Signal from MAS5 with global scaling to 1500
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE rc_AA799636_at
38.555679
A
0.541184
rc_AA859777_f_at
109.005447
A
0.5
U15280_at
39.968681
A
0.918663
AF001953_at
205.943512
A
0.418069
U15425_at
160.725342
A
0.218983
rc_AA893933_at
190.27124
A
0.378184
rc_AI639320_at
38.125687
A
0.302547
X66870_at
1643.398193
P
0.007543
rc_AA891965_at
670.522034
P
0.014937
M75148_at
505.95343
A
0.250724
rc_AA944007_g_at
8951.115234
P
0.000388
M94548_at
15853.33496
P
0.000219
rc_AI638941_at
26.388771
A
0.939581
X90475cds_at
206.525146
A
0.35869
U25651_at
617.072021
P
0.003585
rc_AA875146_s_at
3879.05249
P
0.001892
S35751_f_at
1607.413452
P
0.001354
rc_AA800768_at
92.338425
A
0.107301
rc_AI230789_at
17.194168
A
0.765443
X75785_at
119.801559
P
0.02786
8799 299 Kbytes .Supplementary file Size Download File type/resource GSM42969.CEL.gz
1.8 Mb
(ftp) (http) CEL
GSM42969.CHP.gz
2.8 Mb
(ftp) (http) CHP
GSM42969.EXP.gz
498 b
(ftp) (http) EXP
Processed data provided as supplementary file
