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Status |
Public on Mar 12, 2022 |
Title |
RCC4-siMESH1-1-repl2 |
Sample type |
RNA |
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Source name |
RCC4 transfected with MESH1 siRNA#2, biological rep2
|
Organism |
Homo sapiens |
Characteristics |
cell line: RCC4
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Treatment protocol |
RCC4 cells were transfected with indicated siRNAs for 48 hours
|
Growth protocol |
RCC4 cells grew in the control full DMEM media supplement with 10% FBS and Penicillin/Streptomycin
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA was extracted by RNAeasy kits (Qiagen) according to the manufacturer's instructions.
|
Label |
biotin
|
Label protocol |
Hybridization targets were prepared with MessageAmp™ Premier RNA Amplification Kit (Applied Biosystems/Ambion, Austin, TX) from total RNA, hybridized to GeneChip® ____________ arrays in Affymetrix GeneChip® hybridization oven 645, washed in Affymetrix GeneChip® Fluidics Station 450
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Hybridization protocol |
Hybridization targets were prepared with MessageAmp™ Premier RNA Amplification Kit (Applied Biosystems/Ambion, Austin, TX) from total RNA, hybridized to GeneChip® ____________ arrays in Affymetrix GeneChip® hybridization oven 645, washed in Affymetrix GeneChip® Fluidics Station 450
|
Scan protocol |
scanned with Affymetrix GeneChip® Scanner 7G according to standard Affymetrix GeneChip® Hybridization, Wash, and Stain protocols. (Affymetrix, Santa Clara,CA).
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Data processing |
The data were analyzed with Agilent 2100 Bioanalyzer G2939A
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|
|
Submission date |
Mar 16, 2020 |
Last update date |
Mar 13, 2022 |
Contact name |
Jen-Tsan Chi |
E-mail(s) |
jentsan.chi@duke.edu
|
Phone |
919-668-4759
|
Organization name |
Duke University
|
Department |
Molecular Genetics and Microbiology
|
Street address |
101 Science Drive, DUMC 3382
|
City |
Durham |
State/province |
NC |
ZIP/Postal code |
27708 |
Country |
USA |
|
|
Platform ID |
GPL571 |
Series (1) |
GSE147062 |
MESH1 knockdown triggers proliferation arrest through TAZ repression |
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