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Sample GSM450425 Query DataSets for GSM450425
Status Public on Jul 31, 2012
Title HSY3
Sample type RNA
 
Source name unstimulated primary murine B cell
Organism Mus musculus
Characteristics agent: none
cell type: spleen B cell
age: 5 weeks
Treatment protocol For B cell differentiation, purified murine B cell were treated with IL2, IL5, LPS for 24 hours.
Growth protocol RPMI supplemented with 10% FBS
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using RNAeasy kit from Qiagen.
Label digoxigenin
Label protocol Standard ABI protocol, performed by the Emory Biomarker Core Center (http://www.biomarker.emory.edu/)
 
Hybridization protocol Applied Biosystem mouse genome survey
Scan protocol Standard ABI protocol, performed by the Emory Biomarker Core Center (http://www.biomarker.emory.edu/)
Description HSY3
Data processing Sigle color cDNA microarray was used to analyze absoulte amount of RNA level from each sample. And Fold change data was used to reflects the level in IL2, IL5, LPS stimulated cell divided by control (unstimulated cell).
 
Submission date Sep 08, 2009
Last update date Jul 31, 2012
Contact name Jeremy Boss
E-mail(s) jmboss@emory.edu
Organization name Emory University
Department Micobiology and Immunology
Lab Jeremy Boss
Street address 1510 Clifton Rd
City Atlanta
State/province GA
ZIP/Postal code 30322
Country USA
 
Platform ID GPL2995
Series (1)
GSE17999 ZBTB32 Is an Early Repressor of the CIITA MHC Class II Gene Expression during B Cell Differentiation to Plasma Cells

Data table header descriptions
ID_REF
VALUE The level of absolute RNA expression

Data table
ID_REF VALUE
297784 15.82144584
297907 7.64271962
297912 12.55445395
297935 7.549081917
297990 11.11777457
297993 7.226966043
298000 12.8332973
298038 7.013518091
298121 8.239872961
298130 8.726209643
298143 7.490038568
298150 7.349745648
298151 8.055499366
298155 8.267126096
298165 10.03225929
298174 11.74349225
298188 8.45788358
298200 18.73021939
298246 7.846077986
298248 8.179573251

Total number of rows: 33012

Table truncated, full table size 608 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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