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Sample GSM45096 Query DataSets for GSM45096
Status Public on May 30, 2005
Title hSF-ChIP Chromatin-A-IP2-4
Sample type genomic
 
Channel 1
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name anti-HSF enriched chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Chromatin Immunopurification with anti-Heat Shock Facotor from heat shocked Drosophila embryos
 
Submission date Mar 10, 2005
Last update date May 29, 2005
Contact name Steve Russell
E-mail(s) s.russell@gen.cam.ac.uk
Phone +44 (0) 1223 766929
Fax +44 (0) 1223 333992
Organization name University of Cambridge
Department Department of Genetics
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1898
Series (1)
GSE2398 Drosophila HSF chromatin IP -cDNA array

Data table header descriptions
ID_REF
VALUE VSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1000004685 -1.28909 1040 745 171.982 65.2344 620 452 80.0604 23.7216 421 1443
1000001857 -0.451407 7044 1323 2398.85 154.19 2323 597 598.97 57.8214 421 1443
1000001365 0.303065 4724 978 1312.1 180.877 1172 466 214.977 38.5476 349 1555
1000004504 0.395491 7280 855 2717.61 69.6822 1590 445 416.611 28.1694 421 1443
1000000780 -0.000704807 5749 2064 1261.69 378.063 1553 747 204.599 78.5778 421 1443
1000001590 -0.802655 4818 775 1467.77 69.6822 1902 455 369.167 32.6172 421 1443
1000001591 -0.942688 2485 805 788.743 60.7866 1022 456 210.529 26.6868 349 1555
1000000299 -0.179622 8299 1446 2704.26 171.982 2355 583 514.462 47.4432 421 1443
1000001858 -0.0454719 12722 1427 3730.22 209.047 3262 595 594.523 63.7518 349 1555
1000001859 0.339201 3594 1602 797.639 149.743 946 613 154.19 51.891 349 1555
1000003881 0.777231 4428 792 1614.55 45.9606 959 433 209.047 20.7564 349 1555
1000001592 -0.126093 4049 897 1402.54 91.9212 1210 492 271.316 37.065 349 1555
1000001593 -0.447452 7163 1184 2346.96 250.559 2356 566 576.731 51.891 349 1555
1000001860 -0.0300185 20644 1633 6527.89 194.221 5120 661 1237.97 51.891 349 1555
1000001861 0.221266 5399 862 1768.74 106.747 1343 484 253.525 45.9606 421 1443
1000004686 -0.327794 3492 794 1138.64 59.304 1145 461 223.873 28.1694 349 1555
1000004505 -0.210035 5022 849 1836.94 68.1996 1510 453 378.063 31.1346 349 1555
1000001862 -0.288095 11825 812 3629.4 102.299 3497 461 919.212 42.9954 421 1443
1000001594 0.111638 6940 1278 1750.95 244.629 1737 599 300.968 66.717 421 1443
1000006688 -0.187291 1530 1008 229.803 152.708 591 450 63.7518 28.1694 421 1443

Total number of rows: 5364

Table truncated, full table size 412 Kbytes.




Supplementary data files not provided
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