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Sample GSM45102 Query DataSets for GSM45102
Status Public on May 30, 2005
Title hSF-ChIP Chromatin-A-IP3-1
Sample type genomic
 
Channel 1
Source name anti-HSF enriched chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Chromatin Immunopurification with anti-Heat Shock Facotor from heat shocked Drosophila embryos
 
Submission date Mar 10, 2005
Last update date May 29, 2005
Contact name Steve Russell
E-mail(s) s.russell@gen.cam.ac.uk
Phone +44 (0) 1223 766929
Fax +44 (0) 1223 333992
Organization name University of Cambridge
Department Department of Genetics
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1898
Series (1)
GSE2398 Drosophila HSF chromatin IP -cDNA array

Data table header descriptions
ID_REF
VALUE VSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1000004685 -0.00978881 1058 915 226.838 209.047 74 61 34.0998 26.6868 421 3108
1000001857 -2.13342 6955 1164 1154.95 241.664 378 67 128.986 29.652 489 2996
1000001365 0.488126 1455 1013 295.037 219.425 244 60 88.956 25.2042 421 3108
1000004504 0.863385 2319 1008 472.949 204.599 716 62 303.933 26.6868 489 2996
1000000780 -1.11997 2669 1006 502.601 235.733 234 69 88.956 29.652 577 2884
1000001590 0.118189 1546 915 367.685 206.081 217 64 80.0604 28.1694 577 2884
1000001591 0.313505 1245 901 292.072 201.634 151 63 74.13 26.6868 489 2996
1000000299 -0.619348 1825 998 349.894 220.907 182 63 68.1996 26.6868 489 2996
1000001858 0.725111 2389 1110 560.423 222.39 682 64 186.808 28.1694 489 2996
1000001859 -0.734984 1337 1022 278.729 222.39 90 62 37.065 26.6868 489 2996
1000003881 0.143169 1772 997 397.337 200.151 285 60 112.678 26.6868 577 2884
1000001592 0.3581 1467 906 296.52 207.564 228 64 81.543 26.6868 421 3108
1000001593 1.24927 1189 875 255.007 195.703 246 62 97.8516 26.6868 577 2884
1000001860 0.912563 1873 944 435.884 207.564 524 62 206.081 28.1694 489 2996
1000001861 -0.316008 2405 1087 542.632 237.216 343 75 123.056 32.6172 489 2996
1000004686 -0.438169 1322 979 295.037 210.529 107 64 50.4084 26.6868 577 2884
1000004505 0.0606151 1483 1023 355.824 212.012 192 60 83.0256 25.2042 577 2884
1000001862 -0.183527 8990 1138 1660.51 260.938 1876 78 428.471 34.0998 489 2996
1000001594 0.939989 1552 910 299.485 201.634 376 61 121.573 25.2042 421 3108
1000006688 -0.23607 1134 1042 223.873 212.012 80 62 32.6172 26.6868 489 2996

Total number of rows: 5364

Table truncated, full table size 402 Kbytes.




Supplementary data files not provided
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