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Sample GSM45103 Query DataSets for GSM45103
Status Public on May 30, 2005
Title hSF-ChIP Chromatin-A-IP4-2
Sample type genomic
 
Channel 1
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name anti-HSF enriched chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Chromatin Immunopurification with anti-Heat Shock Facotor from heat shocked Drosophila embryos
 
Submission date Mar 10, 2005
Last update date May 29, 2005
Contact name Steve Russell
E-mail(s) s.russell@gen.cam.ac.uk
Phone +44 (0) 1223 766929
Fax +44 (0) 1223 333992
Organization name University of Cambridge
Department Department of Genetics
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1898
Series (1)
GSE2398 Drosophila HSF chromatin IP -cDNA array

Data table header descriptions
ID_REF
VALUE VSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1000004685 -0.110903 1676 1174 339.515 235.733 86 64 38.5476 28.1694 489 2996
1000001857 0.160494 4457 1329 1104.54 244.629 220 67 90.4386 29.652 489 2996
1000001365 -0.536865 1995 1323 351.376 238.699 125 69 53.3736 29.652 421 3108
1000004504 1.33038 6047 1245 1679.79 249.077 161 67 60.7866 28.1694 489 2996
1000000780 -0.151778 1899 1066 346.928 216.46 101 66 44.478 26.6868 577 2884
1000001590 0.864094 2510 1176 689.409 234.251 93 65 38.5476 26.6868 577 2884
1000001591 -2.1813 1643 1165 355.824 231.286 200 64 84.5082 28.1694 489 2996
1000000299 -0.487221 3198 1215 582.662 225.355 217 64 74.13 28.1694 489 2996
1000001858 -1.28584 3062 1328 570.801 240.181 322 70 102.299 31.1346 421 3108
1000001859 -0.110994 1510 1231 290.59 228.32 76 65 34.0998 28.1694 349 3220
1000003881 -0.0386845 2366 1203 573.766 237.216 124 67 54.8562 29.652 577 2884
1000001592 -0.219839 2227 1170 437.367 231.286 125 66 48.9258 26.6868 421 3108
1000001593 -0.390278 2559 1167 453.676 234.251 159 64 59.304 26.6868 489 2996
1000001860 0.540855 5139 1182 1144.57 238.699 207 66 74.13 28.1694 421 3108
1000001861 0.384446 5947 1865 1700.54 397.337 260 85 97.8516 35.5824 489 2996
1000004686 -0.211687 1972 1148 502.601 223.873 108 63 45.9606 26.6868 489 2996
1000004505 -0.975345 3032 1233 742.783 222.39 266 66 100.817 26.6868 577 2884
1000001862 -0.127687 7560 1445 1313.58 300.968 449 76 131.951 31.1346 489 2996
1000001594 -0.0733931 1761 1173 293.555 226.838 90 66 38.5476 26.6868 421 3108
1000006688 -1.19541 1525 1262 262.42 253.525 111 67 45.9606 28.1694 421 3108

Total number of rows: 5364

Table truncated, full table size 403 Kbytes.




Supplementary data files not provided
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