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Sample GSM45105 Query DataSets for GSM45105
Status Public on May 30, 2005
Title hSF-ChIP Chromatin-B-IP1-1
Sample type genomic
 
Channel 1
Source name anti-HSF enriched chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Chromatin Immunopurification with anti-Heat Shock Facotor from heat shocked Drosophila embryos
 
Submission date Mar 10, 2005
Last update date May 29, 2005
Contact name Steve Russell
E-mail(s) s.russell@gen.cam.ac.uk
Phone +44 (0) 1223 766929
Fax +44 (0) 1223 333992
Organization name University of Cambridge
Department Department of Genetics
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1898
Series (1)
GSE2398 Drosophila HSF chromatin IP -cDNA array

Data table header descriptions
ID_REF
VALUE VSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1000004685 0.487195 396 336 66.717 60.7866 105 42 23.7216 10.3782 421 3108
1000001857 1.65041 720 392 152.708 68.1996 465 42 128.986 10.3782 489 2996
1000001365 -1.04228 1752 367 241.664 63.7518 272 43 54.8562 10.3782 421 3108
1000004504 0.50471 1157 361 220.907 63.7518 429 43 112.678 8.8956 577 2884
1000000780 -1.26144 1348 281 263.903 54.8562 189 42 51.891 8.8956 577 2884
1000001590 0.215931 854 326 177.912 60.7866 254 42 81.543 10.3782 577 2884
1000001591 0.341283 742 319 171.982 62.2692 229 41 75.6126 8.8956 489 2996
1000000299 0.233428 1009 347 183.842 63.7518 312 41 80.0604 8.8956 489 2996
1000001858 -0.466554 2360 385 536.701 68.1996 513 42 128.986 10.3782 489 2996
1000001859 -0.636734 484 365 80.0604 66.717 87 41 23.7216 8.8956 421 3108
1000003881 -0.434064 932 344 171.982 63.7518 199 43 51.891 8.8956 577 2884
1000001592 0.479886 631 318 120.091 60.7866 200 41 48.9258 8.8956 421 3108
1000001593 -0.140457 1069 318 176.429 62.2692 270 41 63.7518 8.8956 489 2996
1000001860 0.774139 1064 352 222.39 65.2344 457 41 140.847 8.8956 489 2996
1000001861 0.784779 725 376 137.882 66.717 283 51 72.6474 11.8608 489 2996
1000004686 -1.81059 953 333 198.668 62.2692 108 42 31.1346 8.8956 577 2884
1000004505 0.00350001 940 356 146.777 63.7518 253 42 54.8562 8.8956 489 2996
1000001862 0.046383 3906 367 796.156 65.2344 1196 45 247.594 10.3782 489 2996
1000001594 0.000345529 448 312 91.9212 60.7866 102 41 47.4432 8.8956 489 2996
1000006688 -0.627076 541 375 96.369 71.1648 100 45 28.1694 10.3782 489 2996

Total number of rows: 5364

Table truncated, full table size 396 Kbytes.




Supplementary data files not provided
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