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Sample GSM45107 Query DataSets for GSM45107
Status Public on May 30, 2005
Title HSF-ChIP Chromatin-B-IP1-2
Sample type genomic
 
Channel 1
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name anti-HSF enriched chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Chromatin Immunopurification with anti-Heat Shock Facotor from heat shocked Drosophila embryos
 
Submission date Mar 10, 2005
Last update date May 29, 2005
Contact name Steve Russell
E-mail(s) s.russell@gen.cam.ac.uk
Phone +44 (0) 1223 766929
Fax +44 (0) 1223 333992
Organization name University of Cambridge
Department Department of Genetics
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1898
Series (1)
GSE2398 Drosophila HSF chromatin IP -cDNA array

Data table header descriptions
ID_REF
VALUE VSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1000004685 0.402851 649 332 99.3342 57.8214 50 42 11.8608 8.8956 421 3108
1000001857 1.31147 2194 391 369.167 68.1996 112 42 31.1346 10.3782 489 2996
1000001365 -0.878168 1517 352 235.733 68.1996 270 42 57.8214 8.8956 421 3108
1000004504 0.797376 3471 366 1015.58 68.1996 233 44 74.13 10.3782 489 2996
1000000780 -1.32376 1072 299 195.703 57.8214 232 41 62.2692 8.8956 577 2884
1000001590 0.416838 1475 336 421.058 62.2692 123 41 32.6172 8.8956 577 2884
1000001591 0.614045 1375 352 443.297 65.2344 103 41 37.065 8.8956 489 2996
1000000299 0.677396 1544 364 286.142 66.717 112 41 28.1694 8.8956 489 2996
1000001858 -0.369761 2255 387 370.65 72.6474 307 42 53.3736 10.3782 421 3108
1000001859 -0.216767 542 371 106.747 72.6474 54 43 14.826 10.3782 421 3108
1000003881 -0.120933 1618 343 379.546 62.2692 184 42 48.9258 8.8956 489 2996
1000001592 0.414053 1117 342 243.146 63.7518 92 41 23.7216 8.8956 421 3108
1000001593 0.219051 1575 320 277.246 60.7866 147 40 41.5128 8.8956 489 2996
1000001860 0.368897 1820 332 452.193 66.717 157 42 44.478 10.3782 489 2996
1000001861 0.863536 2713 450 785.778 90.4386 176 50 44.478 11.8608 489 2996
1000004686 -1.50652 667 330 142.33 60.7866 136 41 41.5128 8.8956 577 2884
1000004505 0.227374 1776 341 422.541 63.7518 166 42 40.0302 8.8956 489 2996
1000001862 -0.262861 6064 393 1073.4 81.543 809 46 146.777 10.3782 489 2996
1000001594 0.332307 1161 311 192.738 59.304 100 40 23.7216 8.8956 421 3108
1000006688 -0.432106 684 373 114.16 72.6474 80 44 19.2738 10.3782 421 3108

Total number of rows: 5364

Table truncated, full table size 395 Kbytes.




Supplementary data files not provided
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