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Sample GSM45176 Query DataSets for GSM45176
Status Public on May 30, 2005
Title HSF-ChIP Chromatin-C-IP1-1
Sample type genomic
 
Channel 1
Source name anti-HSF enriched chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Chromatin Immunopurification with anti-Heat Shock Facotor from heat shocked Drosophila embryos
 
Submission date Mar 11, 2005
Last update date May 29, 2005
Contact name Steve Russell
E-mail(s) s.russell@gen.cam.ac.uk
Phone +44 (0) 1223 766929
Fax +44 (0) 1223 333992
Organization name University of Cambridge
Department Department of Genetics
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1898
Series (1)
GSE2398 Drosophila HSF chromatin IP -cDNA array

Data table header descriptions
ID_REF
VALUE VSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1000000200 0.504819206 1536 435 415.128 80.0604 471 77 148.26 25.2042 421 2983
1000000206 -0.172718123 3630 567 877.699 102.299 791 124 238.699 42.9954 349 3095
1000000207 0.889935436 1642 511 597.488 87.4734 650 93 216.46 32.6172 349 3095
1000000211 -0.727317488 1673 481 438.85 85.9908 251 85 88.956 29.652 349 3095
1000000215 -0.230300712 1699 474 372.133 85.9908 339 79 93.4038 28.1694 349 3095
1000000216 0.261096788 2313 537 716.096 120.091 645 116 228.32 42.9954 421 2983
1000000217 -0.21176981 2606 598 631.588 117.125 544 149 225.355 50.4084 421 2983
1000000224 0.969885369 1451 420 403.267 80.0604 588 79 185.325 28.1694 349 3095
1000000225 0.118516309 1456 424 281.694 80.0604 350 76 96.369 26.6868 421 2983
1000000227 -0.293877704 2116 469 538.184 84.5082 414 84 117.125 28.1694 489 2871
1000000230 0.286468779 1603 488 501.119 83.0256 433 88 146.777 31.1346 349 3095
1000000233 -0.064728989 3693 458 856.943 78.5778 864 71 210.529 25.2042 421 2983
1000000234 0.251112882 3013 450 659.757 78.5778 855 72 225.355 23.7216 577 2759
1000000235 -0.527921349 1501 439 351.376 78.5778 250 72 85.9908 23.7216 293 3179
1000000236 0.200780744 1058 429 223.873 75.6126 250 72 80.0604 25.2042 293 3179
1000000238 -0.057862382 1482 464 312.829 84.5082 322 82 85.9908 28.1694 421 2983
1000000241 0.227118147 2595 609 686.444 120.091 716 159 249.077 53.3736 421 2983
1000000242 -0.202928078 2682 507 631.588 93.4038 564 97 177.912 34.0998 489 2871
1000000243 -1.17328263 3535 450 913.282 87.4734 410 90 131.951 31.1346 421 2983
1000000247 0.335807455 1969 396 392.889 77.0952 565 74 134.917 25.2042 293 3179

Total number of rows: 5364

Table truncated, full table size 421 Kbytes.




Supplementary data files not provided
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