NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM45602 Query DataSets for GSM45602
Status Public on May 30, 2005
Title ChromatinB1-IP1
Sample type genomic
 
Channel 1
Source name anti-HSF enriched chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Genomic tiling array interogated with heat shock factor immunopurified chromatin.
 
Submission date Mar 21, 2005
Last update date May 29, 2005
Contact name Steve Russell
E-mail(s) s.russell@gen.cam.ac.uk
Phone +44 (0) 1223 766929
Fax +44 (0) 1223 333992
Organization name University of Cambridge
Department Department of Genetics
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1918
Series (1)
GSE2423 Tiling Array HSF immunopurification

Data table header descriptions
ID_REF
VALUE VSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1001003457 -0.347214 9318 752 5166.86 34.0998 3511 370 2057.85 19.2738 349 3095
1001003481 -0.2469791 13132 673 4215.03 41.5128 4593 368 1616.03 20.7564 349 3095
1001003505 -0.3268304 11098 629 7633.91 40.0302 4105 369 2871.8 20.7564 421 2983
1001003529 -0.3830273 5343 583 2252.07 50.4084 2109 362 942.934 19.2738 349 3095
1001003553 -0.2654058 13590 750 9985.31 41.5128 4805 380 3445.56 20.7564 489 2871
1001003577 -0.2955625 11658 612 4026.74 28.1694 4221 359 1430.71 17.7912 421 2983
1001003601 -0.3279328 19642 592 6112.76 45.9606 7175 359 2464.08 19.2738 421 2983
1001003625 -0.2741248 8295 614 3537.48 74.13 3001 380 1288.38 25.2042 293 3179
1001003458 -0.2239682 8887 796 4136.45 31.1346 3108 359 1562.66 17.7912 421 2983
1001003482 -0.2291552 3669 617 2805.08 32.6172 1370 362 957.76 17.7912 489 2871
1001003506 -0.2242964 12977 679 5332.91 31.1346 4475 362 2068.23 17.7912 489 2871
1001003530 -0.3410424 12845 592 4567.89 53.3736 4775 360 1533.01 22.239 349 3095
1001003554 -0.1930645 6949 664 5421.87 35.5824 2416 360 1924.41 17.7912 489 2871
1001003578 -0.1609084 13807 700 3066.02 42.9954 4563 359 939.968 17.7912 349 3095
1001003602 -0.2106642 9985 585 6281.78 34.0998 3446 354 2244.66 17.7912 577 2759
1001003626 -0.1873405 5392 565 1355.1 34.0998 1901 352 557.458 16.3086 293 3179
1001003459 -0.1792059 6970 746 3687.23 40.0302 2403 364 1270.59 17.7912 421 2983
1001003483 -0.1968299 9044 661 3236.52 28.1694 3108 363 1144.57 16.3086 349 3095
1001003507 -0.2101684 9695 632 3948.16 29.652 3349 352 1399.57 16.3086 349 3095
1001003531 -0.1825917 2822 579 2103.81 28.1694 1063 351 699.787 14.826 421 2983

Total number of rows: 3333

Table truncated, full table size 256 Kbytes.




Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap