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Sample GSM45606 Query DataSets for GSM45606
Status Public on May 30, 2005
Title ChromatinC1-IP1
Sample type genomic
 
Channel 1
Source name anti-HSF enriched chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Genomic tiling array interogated with heat shock factor immunopurified chromatin.
 
Submission date Mar 21, 2005
Last update date May 29, 2005
Contact name Steve Russell
E-mail(s) s.russell@gen.cam.ac.uk
Phone +44 (0) 1223 766929
Fax +44 (0) 1223 333992
Organization name University of Cambridge
Department Department of Genetics
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1918
Series (1)
GSE2423 Tiling Array HSF immunopurification

Data table header descriptions
ID_REF
VALUE VSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1001003457 0.139612906 35957 2429 5186.13 268.351 24665 355 2760.6 77.0952 665 4128
1001003481 0.114121489 37858 2097 2888.1 246.112 25577 257 1917 62.2692 665 4128
1001003505 0.217541387 39124 1979 5998.6 232.768 28452 162 4136.45 50.4084 861 3872
1001003529 -0.158211462 28628 2942 9730.3 338.033 15739 514 4480.42 146.777 749 4016
1001003553 0.337585775 36785 2722 4507.1 299.485 28999 541 2658.3 105.265 749 4016
1001003577 0.217279194 27324 2166 2240.21 263.903 19469 336 1831.01 78.5778 665 4128
1001003601 -0.01996196 41903 1908 4916.3 234.251 25905 167 2241.69 50.4084 861 3872
1001003625 0.094259734 33585 2536 3097.15 275.764 22240 500 1722.78 97.8516 749 4016
1001003458 0.3751101 26078 2454 2429.98 293.555 20679 440 1577.49 90.4386 665 4128
1001003482 0.220672722 11325 1978 4642.02 238.699 7314 216 3358.09 59.304 861 3872
1001003506 -0.192125918 31367 1929 4622.75 226.838 16939 136 1930.35 47.4432 861 3872
1001003530 -0.293807614 42281 2595 9410.06 289.107 21603 405 3438.15 100.817 577 4244
1001003554 0.257874924 35067 2572 4513.03 293.555 26088 461 2963.72 90.4386 665 4128
1001003578 -0.343799211 46087 2201 5877.03 256.49 22825 270 2103.81 66.717 665 4128
1001003602 -0.025371465 26866 1891 2683.51 234.251 16138 133 1389.2 41.5128 973 3732
1001003626 -0.064015536 11772 2204 1651.62 244.629 6258 192 797.639 50.4084 577 4244
1001003459 0.164632856 29858 2383 2475.94 278.729 20625 410 1412.92 85.9908 665 4128
1001003483 0.072281866 20452 2023 2532.28 241.664 12865 199 1310.62 54.8562 665 4128
1001003507 -0.109792474 22819 1907 1930.35 232.768 12758 121 950.347 40.0302 665 4128
1001003531 -0.301507367 14525 2346 3018.57 269.833 6748 193 1313.58 53.3736 665 4128

Total number of rows: 3333

Table truncated, full table size 266 Kbytes.




Supplementary data files not provided
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