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Sample GSM463347 Query DataSets for GSM463347
Status Public on Mar 01, 2010
Title IMR-90-miR-29-KD(100nM)-3
Sample type RNA
 
Source name total RNA from IMR-90 cells 48hrs after transfection of 100 nM miR-29 LNA KD oligos
Organism Homo sapiens
Characteristics cell type: fetal lung fibroblast
cell line: IMR-90
Biomaterial provider ATCC
Treatment protocol Transfection was carried out using Lipofectamine™ 2000 (Invitrogen)
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen) was used for Total RNA isolation.
Label standard Affymetrix labeling
Label protocol standard Affymetrix labeling
 
Hybridization protocol standard Affymetrix hybridization
Scan protocol standard Affymetrix scanning
Description none
Data processing Affymetrix Expression Console software using RMA algorithm (log2 transformed)
 
Submission date Oct 20, 2009
Last update date Nov 11, 2009
Contact name jining lu
E-mail(s) jining@bu.edu
Phone 617-638-6180
Fax 617-536-8093
Organization name Boston University
Street address 715 Albany street R304
City BoSTON
ZIP/Postal code 02118
Country USA
 
Platform ID GPL6244
Series (1)
GSE18651 miR-29 targets in human fetal lung fibroblast IMR-90 cells

Data table header descriptions
ID_REF
VALUE log(2) transformed

Data table
ID_REF VALUE
7896736 4.495966
7897293 6.229914
7897368 4.780338
7897422 4.121022
7897520 5.482161
7897559 2.930255
7897661 7.906077
7897683 2.353608
7897964 4.547551
7897995 3.002611
7898294 2.041412
7898355 4.787263
7898373 3.498995
7898375 8.826325
7898405 3.937126
7898411 8.826325
7898570 7.81058
7898572 1.902007
7898607 6.464001
7898675 2.222397

Total number of rows: 33297

Table truncated, full table size 549 Kbytes.




Supplementary file Size Download File type/resource
GSM463347.CEL.gz 3.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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