|
| Status |
Public on Feb 02, 2021 |
| Title |
Small intestine neuroendocrine tumor (SINET), 20 |
| Sample type |
genomic |
| |
|
| Channel 1 |
| Source name |
Tumor
|
| Organism |
Homo sapiens |
| Characteristics |
case: 702
gender male (m), female (f): F
tissue: primary tumor
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was isolated from the biopsies using the DNeasy® Blood and Tissue kit (Qiagen GmbH, Hilden, Germany).
|
| Label |
Cy5
|
| Label protocol |
SureTag DNA Labeling Kit; Agilent Technologies Inc
|
| |
|
| Channel 2 |
| Source name |
Human Reference DNA female (Agilent)
|
| Organism |
Homo sapiens |
| Characteristics |
gender reference: Male (M), Female (F): F
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was isolated from the biopsies using the DNeasy® Blood and Tissue kit (Qiagen GmbH, Hilden, Germany).
|
| Label |
Cy3
|
| Label protocol |
SureTag DNA Labeling Kit; Agilent Technologies Inc
|
| |
|
| |
| Hybridization protocol |
SureTag DNA Labeling Kit; Agilent Technologies Inc
|
| Scan protocol |
Arrays were scanned using the Agilent G2565BA Microarray Scanner
|
| Description |
Agilent-013282
|
| Data processing |
Images were quantified using Agilent Feature Extraction Software (version A.8.5.1.1).
|
| |
|
| Submission date |
Jun 26, 2020 |
| Last update date |
Feb 02, 2021 |
| Contact name |
Yvonne Arvidsson |
| E-mail(s) |
yvonne.arvidsson@gu.se
|
| Organization name |
University of Gothenburg
|
| Department |
Biomedicin
|
| Street address |
Box 425
|
| City |
Gothenburg |
| ZIP/Postal code |
40530 |
| Country |
Sweden |
| |
|
| Platform ID |
GPL2879 |
| Series (1) |
| GSE153314 |
SMAD4 haploinsufficiency in small intestinal neuroendocrine tumors |
|
