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Sample GSM46843 Query DataSets for GSM46843
Status Public on Mar 31, 2005
Title Lung - 1502
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.3
Patient Age: 70-80
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 36-40
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 1
Workplace or household smokers?: No
Pathological T: 2
Pathological N: 2
Pathological M: 0
Pathological Stage: 3A
Pathological Grade: 2
Primary Site: Lung
Histology: Bronchioloalveolar carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 352.8 P 0.000662
AFFX-BioB-M_at 438 P 5.2e-005
AFFX-BioB-3_at 249 P 0.001102
AFFX-BioC-5_at 879.6 P 6e-005
AFFX-BioC-3_at 1279.9 P 6e-005
AFFX-BioDn-5_at 2539.6 P 4.4e-005
AFFX-BioDn-3_at 4554.9 P 7e-005
AFFX-CreX-5_at 10086.2 P 5.2e-005
AFFX-CreX-3_at 14751.8 P 4.4e-005
AFFX-DapX-5_at 83.9 P 0.007616
AFFX-DapX-M_at 397.8 P 0.000972
AFFX-DapX-3_at 999 P 7e-005
AFFX-LysX-5_at 63.1 P 0.013797
AFFX-LysX-M_at 106.6 P 0.039661
AFFX-LysX-3_at 257.6 P 7e-005
AFFX-PheX-5_at 44.2 A 0.239044
AFFX-PheX-M_at 93.3 A 0.131361
AFFX-PheX-3_at 198.7 P 0.030976
AFFX-ThrX-5_at 46.6 A 0.262827
AFFX-ThrX-M_at 88.9 M 0.062929

Total number of rows: 54675

Table truncated, full table size 1445 Kbytes.




Supplementary file Size Download File type/resource
GSM46843.CEL.gz 8.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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